学习网站
https://v.fermitech.com.cn/wiki/doku.php?id=adf:tutorialsofresearcherea
https://northword.cn/dft-learning/pages/9909a6
https://zhuanlan.zhihu.com/p/391279503
结构优化
SYSTEM = OPT
ISTART = 0
ICHARG = 2
ISPIN = 2
ENCUT = 500
PREC = Accurate
LREAL = Auto
LWAVE = .FALSE.
LCHARG = .FALSE.
GGA = PE
IVDW = 11
ALGO = Fast
Electronic Relaxation
ISMEAR = 0
SIGMA = 0.05
EDIFF = 1E-5
NELM = 200
NELMIN = 4
Ionic Relaxation
EDIFFG = -1E-2
NSW = 300
IBRION = 2
ISIF = 3
VOSKOWN = 1
自洽
使用命令将结构优化的文件夹(opt)复制为静态计算的文件夹(scf)
cp -r opt scf
打开scf文件夹,将生成的CONTCAR替换POSCAR
cp CONTCAR POSCAR
修改INCAR,只需修改 ISTART = 1 ; ICHARG =1;IBRION = -1; NSW =0
然后保存,提交任务;计算结束后可通过查看CHGCAR (用vesta)分析电荷密度
SYSTEM = scf
ISTART = 1
ICHARG = 1
ISPIN = 2
ENCUT = 500
PREC = Accurate
LREAL = Auto
LWAVE = .TRUE.
LCHARG = .TRUE.
GGA = PE
IVDW = 11
ALGO = Fast
Electronic Relaxation
ISMEAR = 0
SIGMA = 0.05
EDIFF = 1E-5
NELM = 200
NELMIN = 4
Ionic Relaxation
EDIFFG = -2E-2
NSW = 0
IBRION = -1
ISIF = 2
非自洽
在静态计算基础上,进行态密度计算;复制scf文件夹命名为dos
cp -r scf dos
修改INCAR文件:ISTART = 1 ; ICHARG =11;添加 NEDOS=2000; LORBIT=11
提交任务。之后通过vaspkit生成DOS图(前提需要将vaspkit复制到该文件夹下)
SYSTEM = dos
ISTART = 1
ICHARG = 11
ISPIN = 2
ENCUT = 500
PREC = Accurate
LREAL = Auto
LWAVE = .FALSE.
LCHARG = .FALSE.
GGA = PE
IVDW = 12
ALGO = Fast
NEDOS = 2000
LORBIT = 11
Electronic Relaxation
ISMEAR = 0
SIGMA = 0.05
EDIFF = 1E-5
NELM = 200
NELMIN = 4
Ionic Relaxation
EDIFFG = -2E-2
NSW = 0
IBRION = -1
ISIF = 2
VOSKOWN = 1
固定原子
Vaspkit 402
Bader
.处理电荷文件AECCAR0和AECCAR2和CHGCAR来获得BADER CHARGE,这步需要可执行文件bader
和chgsum.pl
,chgsum.pl
的作用是可以将两个电荷密度文件加和得到CHGCAR_sum文件;而bader
是使用CHGCAR和CHGCAR_sum文件来求解bader电荷的。
chgsum.pl AECCAR0 AECCAR2
bader CHGCAR -ref CHGCAR_sum
差分电荷密度
Vaspkit 314
zpe计算
结构优化后,计算原子振动频率来验证结构稳定性。将CONCAR改成POSCAR
在INCAR里修改标签:修改标签IBRION=5,NSW=1(此两个用于做振动频率计算)
增加标签NFREE=2,POTIM=0.015
vaspkit处理zpe(vaspkit处理zpe)
SYSTEM = OPT
ISTART = 0
ICHARG = 2
ISPIN = 2
ENCUT = 480
PREC = Accurate
LREAL = Auto
LWAVE = .FALSE.
LCHARG = .FALSE.
GGA = PE
IVDW = 11
ALGO = Fast
IBRION = 5
NFREE = 2
POTIM = 0.015
Electronic Relaxation
ISMEAR = 0
SIGMA = 0.05
EDIFF = 1E-5
NELM = 200
NELMIN = 4
Ionic Relaxation
EDIFFG = -2E-2
NSW = 1
IBRION = 2
ISIF = 3
VOSKOWN = 1
CHOP
电子局域函数(ELF)
https://zhuanlan.zhihu.com/p/673557485
https://zhuanlan.zhihu.com/p/660119374
功函数
https://zhuanlan.zhihu.com/p/540235298
空位形成能
https://zhuanlan.zhihu.com/p/439006027